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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
ChIP-seq
Assay category
187
DNA binding
Target of assay
123
histone
123
histone modification
73
broad histone mark
50
narrow histone mark
44
control
20
transcription factor
9
RNA binding protein
1
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
67
December, 2017
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
187
bam
142
bed narrowPeak
142
bigWig
120
bigBed narrowPeak
67
fastq
15
bed bed3+
Organism
187
Homo sapiens
Biosample type
136
tissue
43
in vitro differentiated cells
5
primary cell
3
stem cell
Organ
50
blood vessel
50
vasculature
36
liver
28
brain
24
epithelium
21
heart
13
embryo
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
187
AMP
Genome assembly (visualization)
147
hg19
146
GRCh38
Lab
187
AMP-T2D consortium
Audit category:
inconsistent control
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
audit.ERROR.category!
inconsistent control
month_released!
December, 2018
BIOSAMPLE
ASSAY
187 results
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Clear Filters
ChIP-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 8 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
kidney epithelial cell
5
stem cell
hESC
3
See all biosamples
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