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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
216
ChIP-seq
Assay category
216
DNA binding
37
DNA accessibility
23
Transcription
3
3D chromatin structure
2
DNA methylation
Target of assay
185
histone
185
histone modification
115
narrow histone mark
70
broad histone mark
28
control
3
RNA binding protein
3
transcription factor
Date released
91
November, 2017
82
October, 2019
28
May, 2019
15
October, 2017
Available data
194
bam
170
bigWig
168
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
18
fastq
15
bed broadPeak
6
bigBed broadPeak
1
tagAlign bed3+
Organism
216
Homo sapiens
Biosample type
207
tissue
9
primary cell
Organ
525
liver
216
brain
203
pancreas
142
connective tissue
130
heart
104
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
59
blood
59
bodily fluid
36
kidney
35
nerve
34
artery
31
musculature of body
20
spleen
18
embryo
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
216
AMP
Genome assembly (visualization)
169
GRCh38
121
hg19
Lab
216
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
audit.ERROR.category!
inconsistent control
inconsistent ontology term
BIOSAMPLE
ASSAY
216 results
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ChIP-seq
tissue
layer of hippocampus
23
brain
20
substantia nigra
16
angular gyrus
15
caudate nucleus
15
+ See 61 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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