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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
311
ChIP-seq
Assay category
311
DNA binding
Target of assay
311
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
241
November, 2017
49
November, 2018
11
August, 2021
6
December, 2017
4
August, 2017
Available data
306
bigWig
302
bed narrowPeak
300
fastq
299
bam
287
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
311
Homo sapiens
Biosample type
297
cell line
12
tissue
2
in vitro differentiated cells
Organ
311
liver
50
blood
50
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
12
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
311
AMP
Genome assembly (visualization)
302
hg19
259
GRCh38
Lab
300
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
audit.ERROR.category!
inconsistent control
BIOSAMPLE
ASSAY
311 results
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Clear Filters
ChIP-seq
cell line
HepG2
297
tissue
liver
10
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
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