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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
6
ChIP-seq
1
ATAC-seq
Assay category
9
DNA accessibility
6
DNA binding
Target of assay
6
control
Date released
8
January, 2021
3
January, 2019
3
November, 2018
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
bigBed narrowPeak
Organism
15
Homo sapiens
Biosample type
8
primary cell
7
cell line
Organ
766
pancreas
646
connective tissue
480
adipose tissue
428
liver
355
epithelium
294
heart
231
kidney
153
brain
148
vasculature
146
blood vessel
116
artery
75
bone element
55
eye
42
musculature of body
34
limb
31
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
7
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
8
T1D
7
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
7
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
assay_slims!
3D chromatin structure
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
15 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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