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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
370
total RNA-seq
69
single cell RNA-seq
2
small RNA-seq
Assay category
441
Transcription
203
DNA binding
154
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Date released
152
July, 2018
89
August, 2017
42
February, 2023
39
April, 2018
37
May, 2021
26
September, 2018
19
November, 2019
16
September, 2020
6
May, 2022
4
July, 2019
3
August, 2018
3
March, 2020
2
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
374
bam
370
tsv
368
bigWig
248
fastq
6
txt
Organism
441
Homo sapiens
Biosample type
291
tissue
150
primary cell
Organ
479
connective tissue
441
pancreas
401
adipose tissue
193
liver
166
epithelium
166
heart
122
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
23
brain
19
eye
12
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
381
AMP
53
HPAP
7
T1D
Genome assembly (visualization)
368
GRCh38
368
hg19
Lab
375
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
441 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
284
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
11
pancreatic ductal cell
4
10
pancreatic delta cell
11
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