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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
42
transcription factor
29
histone
29
histone modification
19
control
15
broad histone mark
14
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
230
October, 2019
161
May, 2021
117
May, 2019
90
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
25
January, 2019
24
February, 2018
15
October, 2017
9
June, 2019
8
February, 2021
6
September, 2017
2
March, 2020
Available data
90
bam
90
fastq
70
bed narrowPeak
70
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
90
Homo sapiens
Biosample type
48
tissue
39
in vitro differentiated cells
3
stem cell
Organ
63
liver
15
epithelium
9
embryo
Project
90
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
90
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
stem cell
hESC
3
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