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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
907
ChIP-seq
367
total RNA-seq
230
ATAC-seq
180
single cell RNA-seq
56
snATAC-seq
48
WGBS
31
DNase-seq
25
pCHi-C
13
Hi-C
8
RRBS
5
GRO-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
2
Transcription
Date released
2
July, 2019
Available data
2
bam
2
bigWig
2
tsv
Organism
2
Homo sapiens
Biosample type
tissue
2
primary cell
Organ
1
adipose tissue
1
connective tissue
1
musculature of body
Project
2
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
2
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
2 results
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small RNA-seq
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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