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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
254
ChIP-seq
243
total RNA-seq
188
ATAC-seq
180
single cell RNA-seq
56
snATAC-seq
47
WGBS
28
DNase-seq
16
pCHi-C
10
Hi-C
8
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
243
Transcription
Date released
76
February, 2023
55
May, 2021
43
May, 2020
26
September, 2018
16
September, 2020
13
July, 2019
5
December, 2019
4
November, 2020
2
October, 2018
2
October, 2019
1
February, 2021
Available data
148
bigWig
146
bam
146
tsv
120
fastq
2
bed bed3+
Organism
243
Homo sapiens
Biosample type
1036
tissue
243
primary cell
77
cell line
47
in vitro differentiated cells
Organ
93
epithelium
81
pancreas
10
connective tissue
6
kidney
5
liver
4
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
92
HPAP
92
T1D
59
AMP
Genome assembly (visualization)
148
hg19
146
GRCh38
Lab
94
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
57
AMP-T2D consortium
Audit category:
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BIOSAMPLE
ASSAY
243 results
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total RNA-seq
primary cell
monocyte
54
pancreatic alpha cell
52
exocrine cell
39
pancreatic beta cell
21
hepatocyte
5
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