Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
Assay category
14
3D chromatin structure
Date released
8
March, 2020
2
August, 2021
1
March, 2019
1
March, 2023
1
November, 2019
1
October, 2019
Available data
3180
bam
2937
bigWig
1714
bed narrowPeak
1443
tsv
1320
fastq
1018
bigBed narrowPeak
395
tagAlign
318
bed broadPeak
281
bigBed broadPeak
266
bed bed3+
153
zippedFastqFolder
70
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
14
hic
13
bedpe bed3+
12
bed bed3
6
bed bedgraph
5
hdf5
4
tar
3
csv
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
14
Homo sapiens
Biosample type
11
tissue
2
primary cell
1
cell line
Organ
3
heart
3
pancreas
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
epithelium
1
kidney
1
vein
Project
13
AMP
1
ITG
Genome assembly (visualization)
13
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
2
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
inconsistent ontology term
audit script error
audit.ERROR.category!
inconsistent ontology term
audit script error
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
primary cell
chondrocytes
1
endothelial cell of umbilical vein
1
cell line
HepG2
1
See all biosamples
Download