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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
RRBS
1
WGBS
Assay category
9
DNA methylation
Date released
7
July, 2019
1
August, 2017
1
November, 2018
Available data
1277
bam
1208
bigWig
970
fastq
774
bed narrowPeak
458
bigBed narrowPeak
377
tsv
157
tagAlign
153
zippedFastqFolder
106
bed broadPeak
106
bigBed broadPeak
63
bed bed3+
9
bed bedMethyl
9
bigBed bedMethyl
7
bed bed3
7
hic
6
bed bedgraph
6
bedpe bed3+
5
hdf5
4
tar
3
cool
3
txt
2
csv
1
vcf
Organism
9
Homo sapiens
Biosample type
tissue
8
primary cell
1
cell line
Organ
5
epithelium
2
kidney
2
liver
1
brain
1
eye
1
musculature of body
1
vasculature
Project
9
AMP
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
9 results
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RRBS
WGBS
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
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cell line
HepG2
1
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