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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
2
MeRIP-seq
Assay category
28
DNA binding
Target of assay
626
histone modification
625
histone
322
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
11
October, 2018
5
May, 2024
4
April, 2019
4
May, 2019
2
August, 2017
2
December, 2017
2
November, 2020
Available data
27
bigWig
26
bed narrowPeak
23
bam
20
bigBed narrowPeak
15
fastq
2
bed bed3+
Organism
30
Homo sapiens
Biosample type
64
cell line
30
tissue
11
in vitro differentiated cells
7
primary cell
Organ
10
heart
10
pancreas
5
adipose tissue
5
connective tissue
3
blood vessel
3
vasculature
2
liver
1
artery
1
kidney
Project
30
AMP
Genome assembly (visualization)
27
GRCh38
22
hg19
Lab
23
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
2
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
1
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
MeRIP-seq
tissue
body of pancreas
5
left cardiac atrium
5
islet of Langerhans
2
2
heart left ventricle
3
omental fat pad
3
subcutaneous adipose tissue
2
ascending aorta
1
coronary artery
1
kidney
1
liver
1
pancreas
1
right atrium auricular region
1
right lobe of liver
1
thoracic aorta
1
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