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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
16
WGBS
Assay category
33
DNA methylation
Date released
20
July, 2019
7
November, 2018
6
August, 2017
Available data
3067
bam
2887
bigWig
1663
bed narrowPeak
1443
tsv
1347
fastq
935
bigBed narrowPeak
395
tagAlign
283
bed broadPeak
246
bigBed broadPeak
232
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
18
hic
16
bedpe bed3+
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
33
Homo sapiens
Biosample type
24
tissue
8
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed bed3
organ_slims!
limb
BIOSAMPLE
ASSAY
33 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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