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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
3
Hi-C
Assay category
32
DNA accessibility
3
3D chromatin structure
Date released
30
June, 2019
3
July, 2019
2
November, 2018
Available data
241
bam
220
bigWig
201
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
25
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
35
Homo sapiens
Biosample type
27
tissue
8
primary cell
Organ
77
kidney
35
brain
35
limb
33
musculature of body
29
heart
29
pancreas
24
connective tissue
20
epithelium
18
ureter
13
liver
12
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
35
AMP
Genome assembly (visualization)
32
GRCh38
25
hg19
Lab
35
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
35 results
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DNase-seq
Hi-C
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
choroid plexus epithelial cell
1
See all biosamples
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