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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
9
ATAC-seq
5
total RNA-seq
2
Capture-C
Assay category
37
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
5
RNA binding protein
5
control
Date released
47
May, 2021
4
August, 2021
2
February, 2023
Available data
9
bigWig
3
bed narrowPeak
2
bed bed3+
2
bed bedgraph
2
txt
Organism
53
Homo sapiens
Biosample type
559
primary cell
352
tissue
53
in vitro differentiated cells
40
cell line
2
stem cell
Organ
4
connective tissue
Project
53
AMP
Genome assembly (visualization)
11
hg19
Lab
AMP-T2D consortium
47
Kyle Gaulton, UCSD
6
Struan F.A. Grant, CHOP
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
in vitro differentiated cells
embryonic stem cell
37
6
5
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
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