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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
ChIP-seq
Assay category
166
Transcription
130
DNA binding
76
DNA accessibility
9
DNA methylation
3
3D chromatin structure
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
19
control
16
transcription factor
10
RNA binding protein
Date released
57
April, 2019
40
May, 2024
21
May, 2019
6
February, 2021
5
October, 2019
1
June, 2019
Available data
111
bed narrowPeak
111
bigWig
89
bam
61
bigBed narrowPeak
6
tagAlign
Organism
130
Homo sapiens
Biosample type
123
tissue
6
cell line
1
primary cell
Organ
552
liver
216
brain
203
pancreas
142
connective tissue
130
heart
104
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
36
kidney
35
nerve
34
artery
31
musculature of body
20
spleen
18
embryo
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
130
AMP
Genome assembly (visualization)
110
GRCh38
71
hg19
Lab
90
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
April, 2020
BIOSAMPLE
ASSAY
130 results
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ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
35
heart
14
heart right ventricle
13
right atrium auricular region
10
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
1
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