Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1516
ChIP-seq
1314
total RNA-seq
484
ATAC-seq
354
single cell RNA-seq
203
DNase-seq
84
snATAC-seq
66
WGBS
48
pCHi-C
29
Hi-C
18
small RNA-seq
13
RRBS
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
whole genome sequencing assay
Assay category
13
DNA methylation
Date released
13
July, 2019
August, 2017
Available data
13
bed bedMethyl
13
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
7
primary cell
6
tissue
Organ
5
epithelium
3
kidney
2
brain
2
pancreas
1
eye
1
heart
1
liver
1
musculature of body
1
pericardium
1
vasculature
Project
13
AMP
Genome assembly (visualization)
13
hg19
Lab
13
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
August, 2017
assay_title!
whole genome sequencing assay
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
RRBS
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 2 more…
tissue
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
pancreas
1
+ See 1 more…
See all biosamples
Download