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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
WGBS
13
RRBS
Assay category
28
DNA methylation
Date released
21
July, 2019
7
November, 2018
August, 2017
Available data
2898
bam
2698
bigWig
1612
bed narrowPeak
1361
tsv
1053
fastq
976
bigBed narrowPeak
310
tagAlign
277
bed broadPeak
266
bigBed broadPeak
234
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
18
hic
16
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
20
tissue
7
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
3
kidney
2
brain
2
liver
2
musculature of body
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
28
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
August, 2017
August, 2020
BIOSAMPLE
ASSAY
28 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
body of pancreas
2
heart right ventricle
2
spleen
2
+ See 8 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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