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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
Assay category
6
DNA accessibility
Date released
4
February, 2021
2
February, 2023
Available data
3098
bam
2852
bigWig
1707
bed narrowPeak
1385
tsv
1347
fastq
1016
bigBed narrowPeak
395
tagAlign
318
bed broadPeak
281
bigBed broadPeak
263
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
18
hic
16
bedpe bed3+
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
6
bed bedgraph
4
tar
3
cool
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Organ
4
connective tissue
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
4
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
July, 2019
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
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