Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
DNase-seq
15
ChIP-seq
Assay category
202
DNA accessibility
15
DNA binding
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
183
June, 2019
November, 2017
15
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
2788
bam
2603
bigWig
1450
tsv
1401
bed narrowPeak
1023
fastq
706
bigBed narrowPeak
317
tagAlign
267
bed bed3+
248
bed broadPeak
217
bigBed broadPeak
153
zippedFastqFolder
76
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
18
hic
16
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
3
cool
1
bedpe
1
tagAlign bed3+
1
tar
1
vcf
Organism
217
Homo sapiens
Biosample type
175
tissue
40
primary cell
1
cell line
1
in vitro differentiated cells
Organ
77
kidney
35
limb
32
brain
32
musculature of body
29
heart
18
ureter
17
epithelium
12
vasculature
11
blood vessel
8
connective tissue
7
pancreas
5
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
217
AMP
Genome assembly (visualization)
213
GRCh38
194
hg19
Lab
217
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
month_released!
November, 2017
BIOSAMPLE
ASSAY
217 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
12
+ See 39 more…
primary cell
skeletal muscle myoblast
1
13
endothelial cell of umbilical vein
2
2
cardiac fibroblast
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 16 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download