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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
66
February, 2021
8
February, 2023
1
May, 2021
Available data
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
4
txt
Organism
75
Homo sapiens
Biosample type
74
tissue
1
primary cell
Organ
688
liver
687
pancreas
595
connective tissue
458
adipose tissue
356
epithelium
303
kidney
292
heart
164
vasculature
160
blood vessel
121
artery
98
brain
75
bone element
72
limb
68
blood
68
bodily fluid
61
musculature of body
58
eye
21
embryo
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
74
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
74
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
November, 2019
target.investigated_as!
histone
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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