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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
161
ChIP-seq
18
ATAC-seq
16
pCHi-C
1
DNAme array
Assay category
161
DNA binding
Transcription
18
DNA accessibility
1
DNA methylation
Target of assay
139
histone
139
histone modification
76
broad histone mark
63
narrow histone mark
13
transcription factor
9
control
5
RNA binding protein
Date released
406
November, 2017
322
August, 2017
266
October, 2019
196
May, 2021
192
June, 2019
147
May, 2020
140
May, 2022
136
August, 2021
117
May, 2019
102
February, 2023
90
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
68
February, 2021
46
September, 2018
41
July, 2019
36
March, 2020
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
20
November, 2019
16
January, 2021
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
6
November, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
129
bed narrowPeak
124
bigWig
100
bam
87
tagAlign
Organism
196
Homo sapiens
Biosample type
150
primary cell
45
in vitro differentiated cells
1
tissue
Organ
3
epithelium
3
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
100
T1D
96
AMP
Genome assembly (visualization)
137
hg19
99
GRCh38
Lab
175
Kyle Gaulton, UCSD
21
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
196 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 9 more…
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
3
tissue
thymus
1
See all biosamples
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