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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
7
ATAC-seq
Assay category
98
DNA binding
7
DNA accessibility
Target of assay
42
transcription factor
35
histone
35
histone modification
21
control
20
broad histone mark
15
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
528
February, 2021
392
November, 2017
282
August, 2017
275
May, 2020
229
October, 2019
204
May, 2021
192
June, 2019
158
July, 2018
117
May, 2019
90
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
49
April, 2018
49
August, 2021
39
February, 2018
38
November, 2019
34
December, 2018
30
January, 2019
24
May, 2022
15
October, 2017
11
March, 2020
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
2
June, 2018
1
March, 2019
Available data
107
fastq
105
bam
84
bigWig
82
bed narrowPeak
56
bigBed narrowPeak
15
bed bed3+
14
tagAlign
4
bed broadPeak
Organism
105
Homo sapiens
Biosample type
63
tissue
39
in vitro differentiated cells
3
stem cell
Organ
63
liver
15
epithelium
9
brain
9
embryo
4
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
105
AMP
Genome assembly (visualization)
88
GRCh38
87
hg19
Lab
105
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
10
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
38
right lobe of liver
10
brain
8
body of pancreas
4
cerebellum (Hemisphere)
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
stem cell
hESC
3
See all biosamples
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