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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
12
ATAC-seq
1
Hi-C
Assay category
15
DNA binding
12
DNA accessibility
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
18
fastq
16
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
5
bed broadPeak
1
bedpe
1
hic
Organism
28
Homo sapiens
Biosample type
28
tissue
Organ
16
brain
10
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
28
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
22
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
month_released!
August, 2018
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
brain
15
islet of Langerhans
5
1
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
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