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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
26
total RNA-seq
21
ATAC-seq
1
single cell RNA-seq
Assay category
47
DNA binding
27
Transcription
21
DNA accessibility
Target of assay
44
histone
44
histone modification
27
broad histone mark
17
narrow histone mark
3
control
Date released
542
February, 2021
411
August, 2017
406
November, 2017
292
May, 2020
291
October, 2019
192
June, 2019
162
July, 2018
149
August, 2021
117
May, 2019
106
July, 2019
93
February, 2023
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
75
May, 2021
73
September, 2018
49
April, 2018
47
March, 2020
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
22
October, 2017
11
September, 2017
8
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
2
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
89
fastq
87
bam
85
bigWig
58
bed narrowPeak
26
tsv
20
bigBed narrowPeak
14
tagAlign
3
bed broadPeak
1
csv
Organism
95
Homo sapiens
Biosample type
73
primary cell
22
tissue
Organ
76
pancreas
61
epithelium
16
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
95
AMP
Genome assembly (visualization)
85
GRCh38
84
hg19
Lab
95
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
36
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
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