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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
single cell RNA-seq
38
ChIP-seq
26
total RNA-seq
19
ATAC-seq
Assay category
76
Transcription
38
DNA binding
19
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
6
control
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
132
bam
128
fastq
126
bigWig
75
tsv
51
bed narrowPeak
19
bigBed narrowPeak
2
bed bed3+
1
csv
Organism
133
Homo sapiens
Biosample type
121
primary cell
12
tissue
Organ
122
pancreas
99
epithelium
2
connective tissue
Project
133
AMP
Genome assembly (visualization)
128
GRCh38
128
hg19
Lab
133
AMP-T2D consortium
Audit category:
32
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
133 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
6
13
4
4
pancreatic acinar cell
6
8
2
4
pancreatic beta cell
3
10
6
pancreatic alpha cell
3
10
5
pancreatic endocrine cell
11
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tissue
islet of Langerhans
6
6
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