Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
19
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
broad histone mark
11
control
8
narrow histone mark
Date released
26
October, 2019
1
February, 2020
Available data
26
bam
15
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
793
pancreas
748
liver
625
connective tissue
470
adipose tissue
395
epithelium
330
heart
316
kidney
213
brain
190
vasculature
185
blood vessel
127
artery
87
limb
75
bone element
71
musculature of body
69
blood
69
bodily fluid
61
eye
27
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
27
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
27
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
organ_slims!
bone marrow
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
27 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
19
5
2
1
Download