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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
Assay category
2
DNA accessibility
Date released
2
February, 2023
Available data
2600
bam
2377
bigWig
1650
bed narrowPeak
1246
fastq
1000
bigBed narrowPeak
973
tsv
373
tagAlign
309
bed broadPeak
273
bigBed broadPeak
243
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
18
hic
15
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
cool
2
bed bedgraph
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Organ
connective tissue
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
2
Struan F.A. Grant, CHOP
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
2 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
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