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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
WGBS
14
RRBS
1
DNAme array
Assay category
1770
Transcription
1741
DNA binding
752
DNA accessibility
89
DNA methylation
23
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
23
July, 2019
11
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
30
bed bedMethyl
30
bigBed bedMethyl
19
fastq
17
bam
16
bigWig
6
tsv
Organism
89
Homo sapiens
Biosample type
55
primary cell
33
tissue
1
cell line
Organ
53
pancreas
52
epithelium
9
heart
7
liver
6
adipose tissue
6
connective tissue
musculature of body
3
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
42
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
47
Klaus Kaestner, Upenn
42
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
89 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
+ See 5 more…
tissue
heart left ventricle
4
1
liver
3
1
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 11 more…
cell line
HepG2
1
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