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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
1
ATAC-seq
Assay category
60
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
61
Homo sapiens
Biosample type
61
cell line
primary cell
Organ
777
liver
639
connective tissue
524
pancreas
488
adipose tissue
340
heart
303
kidney
262
brain
199
blood vessel
199
vasculature
139
artery
121
limb
81
musculature of body
74
bone element
61
blood
61
bodily fluid
56
eye
43
nerve
37
epithelium
31
embryo
25
spleen
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
Project
61
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
1
inconsistent control
audit.ERROR.category!
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
ATAC-seq
cell line
GM12878
60
1
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