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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
8
DNase-seq
Assay category
476
Transcription
142
DNA binding
30
DNA accessibility
6
DNA methylation
1
3D chromatin structure
Date released
8
February, 2023
5
February, 2021
5
June, 2019
3
October, 2019
2
August, 2017
2
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
1
October, 2017
Available data
17
bigWig
15
bed narrowPeak
12
bam
12
bigBed narrowPeak
9
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
30
Homo sapiens
Biosample type
16
in vitro differentiated cells
7
primary cell
7
tissue
Organ
162
kidney
154
pancreas
102
epithelium
76
heart
57
vasculature
56
blood vessel
49
artery
43
limb
37
brain
34
musculature of body
32
eye
30
connective tissue
28
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
7
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
30
AMP
Genome assembly (visualization)
29
hg19
12
GRCh38
Lab
28
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
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assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
8
1
chondrocyte
5
osteoblast
1
preadipocyte
1
primary cell
osteoblast
2
1
cardiac fibroblast
2
brain pericyte
1
hepatic stellate cell
1
tissue
adipose tissue
3
omental fat pad
1
2
subcutaneous adipose tissue
1
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