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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
472
total RNA-seq
142
ChIP-seq
22
ATAC-seq
8
DNase-seq
6
WGBS
4
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
Assay category
3
Transcription
Date released
3
July, 2019
1
August, 2018
1
February, 2021
1
March, 2020
1
May, 2021
Available data
4
bam
4
tsv
3
bigWig
1
bed bed3+
1
bedpe bed3+
1
fastq
Organism
7
Homo sapiens
Biosample type
3
primary cell
3
tissue
1
in vitro differentiated cells
Organ
7
connective tissue
6
brain
6
liver
5
adipose tissue
4
eye
4
heart
3
musculature of body
3
pancreas
2
intestine
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
kidney
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
vasculature
Project
6
AMP
1
T1D
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
6
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
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BIOSAMPLE
ASSAY
7 results
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pCHi-C
small RNA-seq
primary cell
adult endothelial progenitor cell
1
mesenchymal stem cell of adipose
1
osteoblast
1
tissue
adipose tissue
1
omental fat pad
1
subcutaneous adipose tissue
1
in vitro differentiated cells
white fat cell
1
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