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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
97
total RNA-seq
83
ATAC-seq
69
single cell RNA-seq
47
WGBS
18
DNase-seq
7
Hi-C
5
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
83
DNA accessibility
Date released
39
May, 2022
14
September, 2018
12
February, 2023
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
Available data
39
zippedFastqFolder
34
bed narrowPeak
32
bigWig
32
fastq
22
bam
22
bigBed narrowPeak
Organism
83
Homo sapiens
Biosample type
71
primary cell
12
tissue
Organ
133
pancreas
83
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
22
connective tissue
22
liver
12
bone element
12
skeleton
8
limb
5
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
49
HPAP
34
AMP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
49
Klaus Kaestner, Upenn
34
AMP-T2D consortium
Audit category:
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BIOSAMPLE
ASSAY
83 results
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ATAC-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
tissue
pigmented layer of retina
12
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