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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
DNase-seq
3
ChIP-seq
2
Hi-C
Assay category
15
DNA accessibility
3
DNA binding
2
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
13
June, 2019
3
August, 2021
2
July, 2019
2
October, 2019
Available data
254
bam
252
fastq
244
bigWig
129
bed narrowPeak
120
tsv
80
zippedFastqFolder
71
bigBed narrowPeak
21
bed broadPeak
21
bigBed broadPeak
20
bed bed3+
7
tagAlign
5
bed bedMethyl
5
bigBed bedMethyl
5
hic
4
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
20
Homo sapiens
Biosample type
20
primary cell
Organ
77
kidney
35
brain
35
limb
33
musculature of body
29
heart
29
pancreas
24
connective tissue
20
epithelium
18
ureter
13
liver
12
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
14
hg19
Lab
20
AMP-T2D consortium
Audit category:
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BIOSAMPLE
ASSAY
20 results
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DNase-seq
ChIP-seq
Hi-C
primary cell
hepatocyte
1
3
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
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