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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
13
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
broad histone mark
3
narrow histone mark
Date released
188
August, 2017
152
July, 2018
104
May, 2022
72
September, 2018
56
February, 2023
53
October, 2018
40
May, 2021
39
April, 2018
39
November, 2019
19
September, 2020
18
October, 2019
11
September, 2017
9
March, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
February, 2021
6
July, 2019
5
March, 2019
5
October, 2017
4
June, 2019
4
November, 2020
3
August, 2018
3
October, 2022
2
August, 2021
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
14
bam
8
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
18
Homo sapiens
Biosample type
15
cell line
3
tissue
Organ
84
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
34
epithelium
26
artery
21
eye
21
vein
18
pancreas
17
kidney
8
heart
6
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
18
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
cell line
Panc1
13
1
1
tissue
islet of Langerhans
3
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