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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
42
transcription factor
29
histone
29
histone modification
19
control
broad histone mark
14
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
587
February, 2021
356
November, 2017
333
May, 2020
307
August, 2021
302
August, 2017
236
October, 2019
233
May, 2021
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
106
July, 2019
88
November, 2018
75
December, 2017
59
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
49
April, 2018
47
March, 2020
47
September, 2023
43
April, 2019
39
November, 2019
35
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
13
October, 2017
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
75
bam
75
fastq
55
bed narrowPeak
55
bigWig
40
bigBed narrowPeak
10
bed bed3+
Organism
75
Homo sapiens
Biosample type
45
tissue
28
in vitro differentiated cells
2
stem cell
Organ
53
liver
8
embryo
8
epithelium
Project
75
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
75
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
7
in vitro differentiated cells
hepatocyte
8
pancreatic endoderm
8
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
stem cell
hESC
2
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