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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
139
histone
139
histone modification
72
broad histone mark
67
narrow histone mark
48
control
18
transcription factor
8
RNA binding protein
2
nucleotide modification
Date released
32
August, 2017
19
October, 2018
17
September, 2018
4
October, 2019
Available data
67
bigWig
64
bam
62
bed narrowPeak
52
fastq
30
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
68
Homo sapiens
Biosample type
41
tissue
27
primary cell
4
cell line
Organ
72
pancreas
70
brain
45
blood vessel
45
vasculature
42
liver
40
connective tissue
38
epithelium
37
heart
34
limb
20
adipose tissue
16
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
72
AMP
Genome assembly (visualization)
67
hg19
63
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
72 results
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ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
8
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
Panc1
4
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