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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
949
histone modification
948
histone
495
transcription factor
480
narrow histone mark
467
broad histone mark
328
control
105
RNA binding protein
82
recombinant protein
36
chromatin remodeller
5
other context
5
other post-translational modification
2
nucleotide modification
Date released
68
November, 2017
19
November, 2018
Available data
87
bam
87
fastq
86
bed narrowPeak
86
bigBed narrowPeak
86
bigWig
1
bed broadPeak
1
bigBed broadPeak
Organism
87
Homo sapiens
Biosample type
84
cell line
3
tissue
Organ
84
liver
3
spleen
Project
87
AMP
Genome assembly (visualization)
86
GRCh38
83
hg19
Lab
87
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
87 results
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ChIP-seq
cell line
HepG2
84
tissue
spleen
3
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