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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
WGBS
19
RRBS
Assay category
1544
Transcription
42
DNA methylation
14
DNA accessibility
Date released
23
July, 2019
7
November, 2018
6
August, 2017
6
February, 2021
Available data
41
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
21
fastq
18
bam
17
bigWig
6
tsv
Organism
42
Homo sapiens
Biosample type
25
tissue
16
primary cell
1
cell line
Organ
12
epithelium
12
pancreas
8
heart
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
36
AMP
6
HPAP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
42 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
cell line
HepG2
1
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