Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1321
total RNA-seq
198
single cell RNA-seq
31
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
Assay category
198
Transcription
Target of assay
3
control
Date released
98
August, 2021
48
July, 2018
43
April, 2018
3
August, 2018
3
July, 2019
3
June, 2018
Available data
198
tsv
128
fastq
100
bam
100
bigWig
52
zippedFastqFolder
8
txt
3
csv
Organism
198
Homo sapiens
Biosample type
100
primary cell
98
tissue
Organ
92
heart
74
pancreas
70
epithelium
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
Project
198
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
198
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
audit script error
audit.ERROR.category!
inconsistent replicate
audit script error
BIOSAMPLE
ASSAY
198 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 13 more…
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 8 more…
See all biosamples
Download