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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1451
ChIP-seq
822
total RNA-seq
307
ATAC-seq
178
DNase-seq
176
single cell RNA-seq
86
RNA microarray
37
pCHi-C
28
snATAC-seq
24
Hi-C
22
WGBS
14
small RNA-seq
11
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
14
Transcription
Date released
14
July, 2019
Available data
14
bam
14
bigWig
14
tsv
Organism
14
Homo sapiens
Biosample type
14
tissue
primary cell
Organ
4
brain
3
liver
2
adipose tissue
connective tissue
2
pancreas
1
heart
1
kidney
1
musculature of body
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
audit.ERROR.category!
inconsistent replicate
biosample_type!
primary cell
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
14 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
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