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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
7
total RNA-seq
4
Hi-C
Assay category
18
DNA binding
7
Transcription
4
3D chromatin structure
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
21
October, 2019
4
July, 2019
3
February, 2020
1
May, 2019
Available data
114
bam
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
bed bedMethyl
1
bigBed bedMethyl
Organism
29
Homo sapiens
Biosample type
29
tissue
Organ
726
pancreas
606
connective tissue
476
adipose tissue
367
epithelium
347
liver
194
heart
167
kidney
151
bone element
101
vasculature
100
blood vessel
81
brain
67
artery
32
musculature of body
29
limb
27
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
9
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
29
AMP-T2D consortium
audit.ERROR.category!
inconsistent replicate
files.file_type!
bed narrowPeak
bed bedMethyl
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
total RNA-seq
Hi-C
tissue
tibial nerve
11
5
tibial artery
5
1
gastrocnemius medialis
1
4
islet of Langerhans
1
muscle of leg
1
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