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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
Assay category
10
DNA accessibility
Date released
9
February, 2023
1
February, 2021
Available data
3148
bam
2907
bigWig
1574
tsv
1573
bed narrowPeak
1337
fastq
915
bigBed narrowPeak
280
tagAlign
275
bed broadPeak
247
bigBed broadPeak
238
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
10
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
10
Homo sapiens
Biosample type
5
in vitro differentiated cells
4
tissue
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
brain
Project
10
AMP
Genome assembly (visualization)
10
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
inconsistent replicate
audit.ERROR.category!
inconsistent replicate
organ_slims!
brain
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
primary cell
osteoblast
1
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