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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
26
histone
histone modification
14
broad histone mark
12
narrow histone mark
10
control
4
transcription factor
Date released
7
August, 2021
5
May, 2021
2
August, 2017
Available data
212
bam
181
bigWig
131
tsv
76
fastq
54
bed narrowPeak
17
bed bed3+
14
tagAlign
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
5
bigBed narrowPeak
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
14
Homo sapiens
Biosample type
52
tissue
14
in vitro differentiated cells
9
cell line
2
primary cell
Organ
2
connective tissue
2
epithelium
2
pancreas
Project
14
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
14
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
audit.ERROR.category!
inconsistent replicate
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
7
cardiomyocytes
3
adipocyte
2
pancreatic PP cell
2
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