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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
ChIP-seq
166
total RNA-seq
129
ATAC-seq
113
single cell RNA-seq
56
snATAC-seq
31
DNase-seq
17
pCHi-C
10
RRBS
7
Hi-C
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
129
DNA accessibility
Date released
100
May, 2020
13
May, 2021
12
February, 2023
2
October, 2019
1
February, 2021
1
November, 2020
Available data
62
bam
46
bigWig
17
bed narrowPeak
12
tsv
1
bed bed3
Organism
129
Homo sapiens
Biosample type
198
tissue
129
primary cell
42
in vitro differentiated cells
9
cell line
Organ
72
epithelium
pancreas
2
connective tissue
1
liver
Project
129
AMP
Genome assembly (visualization)
62
hg19
17
GRCh38
Lab
129
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
audit.ERROR.category!
inconsistent replicate
organ_slims!
pancreas
BIOSAMPLE
ASSAY
129 results
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ATAC-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
monocyte
15
macrophage
11
gabaergic neuron
3
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