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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
2
RNA microarray
2
single cell RNA-seq
Assay category
4
3D chromatin structure
DNA accessibility
2
Transcription
Date released
February, 2021
4
December, 2019
3
October, 2022
1
October, 2019
Available data
4
hic
4
tsv
3
bedpe bed3+
3
cool
Organism
8
Homo sapiens
Biosample type
4
primary cell
2
in vitro differentiated cells
2
tissue
Organ
5
epithelium
3
pancreas
2
kidney
1
blood vessel
1
vasculature
1
vein
Project
5
AMP
3
HPAP
Genome assembly (visualization)
4
hg19
Lab
5
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
179
inconsistent ontology term
28
inconsistent control
8
audit script error
assay_slims!
DNA accessibility
month_released!
February, 2021
BIOSAMPLE
ASSAY
8 results
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Hi-C
RNA microarray
single cell RNA-seq
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
tissue
kidney interstitium
1
renal glomerulus
1
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