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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
snATAC-seq
7
single cell RNA-seq
RNA microarray
Assay category
29
DNA accessibility
7
Transcription
Date released
32
February, 2021
2
December, 2019
1
August, 2022
1
May, 2022
Available data
27
fastq
7
tsv
6
txt
5
csv
hic
3
bedpe bed3+
3
cool
1
bed bed3+
Organism
36
Homo sapiens
Biosample type
27
primary cell
7
tissue
2
in vitro differentiated cells
Organ
5
kidney
1
musculature of body
1
pancreas
Project
27
HPAP
9
AMP
Genome assembly (visualization)
1
hg19
Lab
27
Klaus Kaestner, Upenn
9
AMP-T2D consortium
Audit category:
264
inconsistent ontology term
36
audit script error
28
inconsistent control
1
inconsistent replicate
files.file_type!
hic
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
36 results
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snATAC-seq
single cell RNA-seq
primary cell
Langerhans cell
27
tissue
kidney
5
islet of Langerhans
1
skeletal muscle tissue
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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