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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
RNA microarray
2
snATAC-seq
1
Hi-C
Assay category
7
Transcription
2
DNA accessibility
1
3D chromatin structure
Date released
5
February, 2021
2
December, 2019
1
August, 2022
1
May, 2022
1
October, 2019
Available data
7
tsv
6
txt
5
csv
1
bed bed3+
1
hic
Organism
10
Homo sapiens
Biosample type
7
tissue
2
in vitro differentiated cells
1
primary cell
Organ
5
kidney
1
blood vessel
1
epithelium
1
musculature of body
1
pancreas
1
vasculature
1
vein
Project
10
AMP
Genome assembly (visualization)
2
hg19
Lab
Klaus Kaestner, Upenn
10
AMP-T2D consortium
Audit category:
269
inconsistent ontology term
28
inconsistent control
10
audit script error
1
inconsistent replicate
lab.title!
Klaus Kaestner, Upenn
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
10 results
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single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
5
islet of Langerhans
1
skeletal muscle tissue
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
primary cell
endothelial cell of umbilical vein
1
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