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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
snATAC-seq
2
single cell RNA-seq
1
Hi-C
Assay category
29
DNA accessibility
2
Transcription
1
3D chromatin structure
Date released
27
February, 2021
2
December, 2019
1
August, 2022
1
May, 2022
1
October, 2019
Available data
27
fastq
4
hic
bedpe bed3+
3
cool
2
tsv
1
bed bed3+
1
txt
Organism
32
Homo sapiens
Biosample type
28
primary cell
2
in vitro differentiated cells
2
tissue
Organ
kidney
2
epithelium
1
blood vessel
1
musculature of body
1
pancreas
1
vasculature
1
vein
Project
27
HPAP
5
AMP
Genome assembly (visualization)
2
hg19
Lab
27
Klaus Kaestner, Upenn
5
AMP-T2D consortium
Audit category:
323
inconsistent ontology term
32
audit script error
28
inconsistent control
1
inconsistent replicate
organ_slims!
kidney
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
32 results
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snATAC-seq
single cell RNA-seq
Hi-C
primary cell
Langerhans cell
27
endothelial cell of umbilical vein
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
tissue
islet of Langerhans
1
skeletal muscle tissue
1
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