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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
1
ChIP-seq
Assay category
4
3D chromatin structure
1
DNA binding
Target of assay
1
chromatin remodeller
1
transcription factor
Date released
3
October, 2022
1
December, 2018
1
October, 2019
Available data
4
hic
3
bedpe bed3+
3
cool
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
Organism
5
Homo sapiens
Biosample type
tissue
4
primary cell
1
cell line
Organ
4
epithelium
3
pancreas
1
blood
1
blood vessel
1
bodily fluid
1
vasculature
1
vein
Project
3
HPAP
2
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
210
inconsistent ontology term
4
audit script error
1
inconsistent control
1
inconsistent replicate
biosample_type!
tissue
BIOSAMPLE
ASSAY
5 results
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Hi-C
ChIP-seq
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
GM12878
1
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