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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Assay category
9
Transcription
Date released
84
February, 2021
6
July, 2018
2
December, 2019
1
June, 2018
Available data
84
txt
9
tsv
7
bam
7
bigWig
7
fastq
Organism
93
Homo sapiens
Biosample type
84
tissue
7
primary cell
2
in vitro differentiated cells
Organ
84
bone element
5
pancreas
1
epithelium
Project
93
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
93
AMP-T2D consortium
Audit category:
93
inconsistent ontology term
9
audit script error
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
93 results
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RNA microarray
single cell RNA-seq
tissue
bone element
84
primary cell
co-expressing pancreatic endocrine cell
2
unclassified exocrine cell
2
unclassified pancreatic endocrine cell
2
pancreatic acinar cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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